Publications

Edward M. Bello, Madeline Blumenfeld, Joan Dao, Lucius K Wilmerding, Jordan Krieg and Matthew D. Johnson. (2021) "Considerations using harmaline for a primate model of tremor." Tremor and Other Hyperkinetic Disorders.

Matthew D. Johnson, Yazan M. Dweiri, Jason Cornelius, Kingman P. Strohl, Armin Steffen, Maria Suurna, Ryan J. Soose, Michael Coleman, John Rondoni, Dominique M. Durand, Quan Ni. (2021) "Model-based analysis of implanted hypoglossal nerve stimulation for the treatment of obstructive sleep apnea." Sleep.

Lauren E. Schrock, Remi Patriat, Mojgan Goftari, Jiwon Kim, Matthew D. Johnson, Noam Harel and Jerrold L. Vitek. (2021) "7T MRI and Computational Modeling Supports a Critical Role of Lead Location in Determining Outcomes for Deep Brain Stimulation: A Case Report." Frontiers in Human Neuroscience.

AnneMarie K. Brinda, Alex M. Doyle, Madeline Blumenfeld, Jordan Krieg, Joseph S.R. Alisch, Chelsea Spencer, Emily Lecy, Lucius K Wilmerding, Adele DeNicola, Luke A. Johnson, Jerrold L. Vitek and Matthew D. Johnson. (2021) "Longitudinal analysis of local field potentials recorded from directional deep brain stimulation lead implants in the subthalamic nucleus." Journal of Neural Engineering.

Edgar Peña, Tareq M. Mohammad, Fedaa Almohammed, Tahani AlOtaibi, Shahpar Nahrir, Sheraz Khan, Vahe Poghosyan, Matthew D. Johnson and Jawad A. Bajwa. (2021) "Individual Magnetoencephalography Response Profiles to Short-Duration L-Dopa in Parkinson’s Disease." Frontiers in Human Neuroscience.

Julia P. Slopsema, Antonietta Canna, Michelle Uchenik, Lauri J. Lehto, Jordan Krieg, Lucius Wilmerding, Dee M. Koski, Naoharu Kobayashi, Joan Dao, Madeline Blumenfeld, Pavel Filip, Hoon Ki Min, Silvia Mangia*, Matthew D. Johnson*, Shalom Michaeli*. (2021) "Orientation-selective and directional deep brain stimulation in swine assessed by functional MRI at 3T." NeuroImage.

Mojgan Goftari, Jiwon Kim, Elliot Johnson, Remi Patriat, Tara Palnitkar, Noam Harel, Matthew D. Johnson, Lauren E. Schrock. (2020) "Pallidothalamic tract activation predicts suppression of stimulation-induced dyskinesias in a case study of Parkinson’s disease." Brain Stimulation.

Edward M. Bello II, Filippo Agnesi, YiZi Xiao, Joan Dao, and Matthew D. Johnson. (2020) "Frequency-dependent spike-pattern changes in motor cortex during thalamic deep brain stimulation." Journal of Neurophysiology.

Luke Johnson, Ivan Alekseichuk, Jordan Krieg, Alex Doyle, Ying Yu, Jerrold Vitek, Matthew Johnson,Alexander Opitz. (2020) "Dose-dependent effects of translational alternating current stimulation on spike timing in awake nonhuman primates." Science Advances.

Logan L. Grado, Matthew D. Johnson, Theoden I. Netoff. (2018) "Bayesian adaptive dual control of deep brain stimulation in a computational model of Parkinson's disease." PLOS Computational Biology.

Peña E, Zhang S, Patriat R, Aman J, Vitek J, Harel N, Johnson MD. (2018) “Multi-objective particle swarm optimization for postoperative deep brain stimulation targeting of subthalamic nucleus pathways.” Journal of Neural Engineering.

Slopsema JP, Peña E, Patriat R, Lehto LJ, Gröhn O, Magia S, Harel N, Michaeli S, Johnson MD. (2018) "Clinical deep brain stimulation strategies for orientation-selective pathway activation." Journal of Neural Engineering.

Zhang S, Connolly AT, Madden LR, Vitek JL, and Johnson MD. (2018) "High-resolution local field potentials measured with deep brain stimulation arrays." Journal of Neural Engineering.

Xiao Y, Agnesi F, Bello EM, Zhang S, Vitek JL, and Johnson MD. (2018) "Deep brain stimulation induces sparse distributions of locally modulated neuronal activity." Nature Scientific Reports.

Ramirez-Zamora A, Giordano JJ, Gunduz A, Brown P, Sanchez J, Foote KD, Almeida L, Starr P, Bronte-Stewart HM, Hu W, McIntyre CC, Goodman W, Kumsa D, Grill WM, Walker H, Johnson MD, Vitek JL, Greene D, Rizzuto DS, Song D, Berger TWW, Hampson RE, Deadwyler SA, Hochberg L, Schiff ND, Stypulkowski P, Worrell G, Vineet T, Mayberg HS, Jimenez-Shahed J, Pranav N, Sameer S, Gross RE, Lempka S, Li L, Deeb W, and Oakum M. (2018) "Evolving applications, technological challenges and future opportunities in neuromodulation: Proceedings of the fifth annual deep brain stimulation think tank." Frontiers in Neuroscience. 11:734

Grado LL, Johnson MD, and Netoff TI. (2017) “The Sliding Windowed Infinite Fourier Transform.” IEEE Signal Processing Magazine. 34(5):183-188

Lehto LJ, Slopsema JP, Johnson MD, Shatillo A, Teplitzky BA, Utecht L, Adriany G, Mangia S, Sierra A, Low WC, Gröhn O, and Michaeli S. (2017) “Orientation selective deep brain stimulation.” Journal of Neural Engineering. 14:016016

Peña E, Zhang S, Deyo S, Xiao Y, Johnson MD. (2017) “Particle swarm optimization for programming deep brain stimulation arrays.” Journal of Neural Engineering. 14:016014

Teplitzky BA, Zitella LM, Xiao Y, and Johnson MD. (2016) “Model-based comparison of deep brain stimulation array functionality with varying number of radial electrodes and machine learning feature sets.” Frontiers in Computational Neuroscience. 10:58.

Xiao Y, Zitella LM, Duchin Y, Teplitzky BA, Kastl D, Adriany G, Yacoub E, Harel N, and Johnson MD. (2016) “Multimodal 7T imaging of thalamic nuclei for preclinical deep brain stimulation applications.” Frontiers in Neuroscience. 10:264.

Xiao Y, Peña E, and Johnson MD. (2016) “Theoretical optimization strategies for directionally segmented deep brain stimulation electrode arrays.” IEEE Transactions on Biomedical Engineering. 63(2):359-71.

Neren D, Johnson MD, Legon W, Bachour SP, Ling G, and Divani AA. (2016) “Vagus nerve stimulation and other neuromodulation methods for treatment of traumatic brain injury.” Neurocritical Care. 24(2):308-19.

Connolly AT, Vetter RJ, Hetke JF, Teplitzky BA, Kipke DR, Pellinen DS, Anderson DJ, Baker KB, Vitek JL, and Johnson MD. (2016) “A novel lead design for modulation and sensing of deep brain structures.” IEEE Transactions on Biomedical Engineering. 63(1): 148-157.

Xiao Y and Johnson MD. (2015) "Spherical statistics for characterizing the spatial distribution of deep brain stimulation effects on neuronal activity." Journal of neuroscience methods 255 (2015): 52-65.

Connolly AT, Muralidharan A, Hendrix C, Gupta R, Stanslaski S, Denison T, Baker KB, Vitek JL, and Johnson MD. (2015) “Local field potential recordings in a non-human primate model of Parkinson’s disease using the Activa® PC+S.” Journal of Neural Engineering, 12:066012.

Agnesi F, Muralidharan A, Baker KB, Vitek JL, and Johnson MD. (2015) “Fidelity of frequency and phase entrainment of circuit-level spike activity during DBS.” Journal of Neurophysiology, 114(2):825-834.

Connolly AT, Jensen AL, Baker KB, Vitek JL, and Johnson MD. (2015) "Classification of pallidal oscillations with increasing parkinsonian severity." Journal of Neurophysiology, 114(1): 209-218.

Zitella LM, Teplitzky BA, Hudson HM, Duchin Y, Harel N, Vitek JL, Baker KB, and Johnson MD. (2015) "Subject-specific computational modeling of DBS in the PPTg area." Frontiers in Computational Neuroscience, 9:93

Zitella L, Xiao Y, Teplitzky B, Kastl DJ, Duchin Y, Baker KB, Vitek JL, Adriany G, Yacoub E, Harel N, and Johnson MD. (2015) "In-vivo 7T MRI of the non-human primate brainstem." PLoS ONE, e0127049.

Connolly AT, Jensen AL, Bello EM, Netoff TI, Baker KB, Johnson MD, and Vitek JL. (2015) "Modulations in oscillatory frequency and coupling in globus pallidus with increasing parkinsonian severity." Journal of Neuroscience, 35(15):6231-6240.

Teplitzky BA, Connolly AT, Bajwa JA, and Johnson MD. (2014) "Computational modeling of an endovascular approach to deep brain stimulation." Journal of Neural Engineering, 11:026011.

LaRoy JJL, Teplitzky BA, and Johnson MD. (2014) "Multi-tine deep brain stimulation leads to shape neural activation in three dimensions." Journal of Medical Devices. 8(2):020919.

Mohsenian KJ, Connolly AT, and Johnson MD. (2014) "Multi-joint rigidity-testing device for titrating medication and deep brain stimulation therapies." Journal of Medical Devices. 8(2):020919.

Agnesi F, Connolly AT, Baker KB, Vitek JL, and Johnson MD. (2013) "Deep brain stimulation imposes complex informational lesions." PLoS ONE. 8(8):e744562.

Johnson MD, Lim HH, Netoff TI, Connolly AT, Johnson N, Roy A, Holt A, Lim KO, Carey JR, Vitek JL, and He B. (2013) "Neuromodulation for Brain Disorders: Challenges and Opportunities" IEEE Transactions on Biomedical Engineering. 60(3):610-623.

Zitella L*, Mohsenian K*, Pahwa M, Gloeckner C, and Johnson MD. (2013) "Computational modeling of pedunculopontine nucleus deep brain stimulation." Journal of Neural Engineering. 10(4):045005.

Keane M, Deyo S, Abosch A, Bajwa JA, and Johnson MD. (2012) "Improved spatial targeting with directionally segmented deep brain stimulation leads for treating essential tremor." Journal of Neural Engineering, 9(4):046005.

Johnson MD, Zhang J, Ghosh D, McIntyre CC, and Vitek JL. (2012) "Neural targets for relieving parkinsonian rigidity and bradykinesia with pallidal deep brain stimulation." Journal of Neurophysiology, 108:567-577.

Connolly AT, Bajwa JA, and Johnson MD. (2012) "Cortical magnetoencephalography of deep brain stimulation for the treatment of postural tremor." Brain Stimulation, 5(4):616-624.

Lempka S, Johnson MD, Moffitt M, Otto KJ, Kipke DR, and McIntyre CC. (2011) "Theoretical analysis of intracortical microelectrode recordings." Journal of Neural Engineering, 8(4):045006

Martens HCF, Toader E, Decré MMJ, Anderson DJ, Vetter R, Kipke DR, Baker KB, Johnson MD, and Vitek JL. (2011) "Spatial steering of deep brain stimulation volumes using a novel lead design." Clin. Neurophys., 122(3):558-566.

Lempka SF, Johnson MD, Miocinovic S, Vitek JL, and McIntyre CC. (2010) "Current-controlled deep brain stimulation reduces in vivo voltage fluctuations observed during voltage-controlled stimulation." Clin. Neurophys., 121(12):2128-2133.

Lee J, Johnson MD, Kipke DR. (2010) "A tunable biquad switched-capacitor amplifier for neural recordings." Trans Biomed Circ and Sys., 4(5):295-300.

Johnson MD, Vitek JL, and McIntyre CC. (2009) "Pallidal stimulation that improves parkinsonian motor symptoms also modulates neuronal firing patterns in primary motor cortex in the MPTP-treated monkey." Experimental Neurology, 219(1):359-362.

Lempka SF, Miocinovic S, Johnson MD, Vitek JL, and McIntyre CC (2009) "In vivo impedance spectroscopy of deep brain stimulation electrodes." Journal of Neural Engineering, 6(4): 1-11.

Mera TO, Johnson MD, Rothe D, Zhang J, Xu W, Ghosh D, Vitek JL, and Alberts JL. (2009) "Objective quantification of arm rigidity in MPTP-treated primates." Journal Neuroscience Methods, 177:20-29.

Johnson MD and McIntyre CC. (2008) "Quantifying the neural elements activated and inhibited by globus pallidus deep brain stimulation." Journal of Neurophysiology, 100(5):2549-2563.

Johnson MD, Miocinovic S, McIntyre CC, and Vitek JL. (2008) "Mechanisms and targets of deep brain stimulation in movement disorders." Neurotherapeutics, 5(2): 294-308. [article featured on the cover]

Johnson MD, Franklin RK, Gibson MD, Brown RB, and Kipke DR. (2008) "Implantable microelectrode arrays for simultaneous electrophysiological and neurochemical recordings." Journal of Neuroscience Methods, 174(1):62-70.

Johnson MD, Kao OE, and Kipke DR. (2007) "Spatiotemporal pH dynamics following insertion of neural microelectrode arrays." Journal of Neuroscience Methods, 160(2): 276-287.

Otto KJ, Johnson MD, and Kipke DR. (2006) "Bias voltages change neural interface properties and improve unit recordings with chronically implanted microelectrodes." IEEE Transactions on Biomedical Engineering, 53(2): 333-340.

Johnson MD, Otto KJ., and Kipke DR. (2005) "Repeated voltage biasing improves unit recording by reducing resistive tissue impedances." IEEE Transactions on Neural Systems and Rehabilitation Engineering, 13(2): 160-165.

Slopsema JP, Johnson MD. "Deep Brain Stimulation" (2017) in Neuroprosthetics Theory and Practice, 2nd edition, editors Horch k and Kipke D., 3.8: 762-789.

Agnesi F, Johnson MD, and Vitek JL. “Deep brain stimulation: how does it work?” (2013) in Handbook of Clinical Neurology, Brain Stimulation, 3rd series, 116:39-54.

Johnson MD, McIntyre CC, and Vitek JL. "Deep brain stimulation: Mechanisms of action." (2011) in Youmans Neurological Surgery, 6th edition, editor Winn R., 83: 975-986.

Bajwa J, Johnson MD, and Vitek JL. (2009) "The pathophysiology of dystonia" in Textbook in Stereotactic and Functional Neurosurgery, 2nd edition., editors Lozano A and Gildenberg PL., 107: 1779-1800.